Physiol. Genomics:APS Articles in PresS (date view)

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American Physiological Society Journals Online
Articles in PresS

APS Articles in PresS are accepted, peer-reviewed papers published online in manuscript form before they are copyedited and published in a printed issue of the APS journal to which they were submitted. Articles in PresS are published online within a few days of being accepted, thus giving Authors and Readers immediate, subscription-based access to the newest research. Future print publication may differ slightly from the Articles in PresS version as a result of copyediting; the graphics quality may also be different. On each article's first page, the publication date appears above the title, followed by the article's unique Digital Object Identifier (DOI).
Learn more about Articles in PresS.

Articles in PresS will be available for the following journals:

Physiological Genomics
AJP-Cell Physiology
AJP-Endocrinology and Metabolism
AJP-Gastrointestinal and Liver Physiology
AJP-Heart and Circulatory Physiology

AJP-Lung, Cellular and Molecular Physiology
AJP-Regulatory, Integrative and Comparative Physiology
AJP-Renal Physiology
Journal of Applied Physiology
Journal of Neurophysiology

Physiological Genomics Articles in PresS: Last updated June 30, 2009

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

30 June 2009

Dermot Gerard Morris, Sinead M. Waters, Sean D McCarthy, Joe Patton, Bernadette Earley, Richard Fitzpatrick, John J Murphy, Michael G Diskin, David A Kenny, Andy Brass, and D Claire Wathes: Pleiotropic effects of negative energy balance in the post partum dairy cow on splenic gene expression: repercussions for innate and adaptive immunity
Physiol. Genomics (June 30, 2009). doi:10.1152/physiolgenomics.90394.2008 [Abstract] [PDF]

He S. Yang, Martha Hotz Vitaterna, Aaron D. Laposky, Kazuhiro Shimomura, and Fred W. Turek: Genetic analysis of daily physical activity using a mouse chromosome substitution strain
Physiol. Genomics (June 30, 2009). doi:10.1152/physiolgenomics.00066.2009 [Abstract] [PDF]

D Claire Wathes, Zhangrui Cheng, Waliul Chowdhury, Mark A Fenwick, Richard Fitzpatrick, Dermot Gerard Morris, Joe Patton, and John J Murphy: Negative energy balance alters global gene expression and immune responses in the uterus of postpartum dairy cows
Physiol. Genomics (June 30, 2009). doi:10.1152/physiolgenomics.00064.2009 [Abstract] [PDF]

23 June 2009

Min Ok Song, Jianying Li, and Jonathan H Freedman: Physiological and Toxicological Transcriptome Changes in HepG2 Cells Exposed to Copper
Physiol. Genomics (June 23, 2009). doi:10.1152/physiolgenomics.00083.2009 [Abstract] [PDF]

Frederick William Goetz, Matthew L. Rise, Marlies Rise, Giles W. Goetz, Frederick Binkowski, and Brian S Shepherd: Stimulation of growth and changes in the hepatic transcriptome by estradiol-17 ${beta}$ in the yellow perch (Perca flavescens)
Physiol. Genomics (June 23, 2009). doi:10.1152/physiolgenomics.00069.2009 [Abstract] [PDF]

16 June 2009

Javad Nadaf, Frédérique Pitel, Hélène Gilbert, Michel J. Duclos, Florence Vignoles, Catherine Beaumont, Alain Vignal, Tom E. Porter, Larry A. Cogburn, Samuel E Aggrey, Jean Simon, and Elisabeth Le Bihan-Duval: QTL for several metabolic traits map to loci controlling growth and body composition in an F₂ inter-cross between high- and low-growth chicken lines
Physiol. Genomics (June 16, 2009). doi:10.1152/physiolgenomics.90384.2008 [Abstract] [PDF] [Supplemental Figures]

Derek J. Pappas, Giovanni Coppola, Pablo A. Gabatto, Fuying Goa, Daniel H. Geschwind, Jorge R. Oksenberg, and Sergio E. Baranzini: Longitudinal system-based analysis of transcriptional responses to type I interferons
Physiol. Genomics (June 16, 2009). doi:10.1152/physiolgenomics.00058.2009 [Abstract] [PDF] [Supplemental Material]

Han Zhang, Xunsheng Chen, Wendy Bollinger Bollag, Roni J Bollag, Daniel J. Sheehan, and Catherine S. Chew: Lasp1 gene disruption is linked to enhanced cell migration and tumor formation
Physiol. Genomics (June 16, 2009). doi:10.1152/physiolgenomics.00048.2009 [Abstract] [PDF] [Supplemental Tables]

9 June 2009

An N Dang Do, Scot R. Kimball, Douglas R. Cavener, and Leonard S. Jefferson: The eIF2 ${alpha}$ Kinases GCN2 and PERK Modulate the Transcription and Translation of Distinct Sets of mRNAs in Mouse Liver
Physiol. Genomics (June 9, 2009). doi:10.1152/physiolgenomics.90396.2008 [Abstract] [PDF] [Supplemental Tables]

Stephen Welle, Andrew Cardillo, Michelle Zanche, and Rabi Tawil: Skeletal muscle gene expression after myostatin knockout in mature mice
Physiol. Genomics (June 9, 2009). doi:10.1152/physiolgenomics.00054.2009 [Abstract] [PDF] [Supplemental Data]

Dapeng Zhang, Jason T. Popesku, Christopher J Martyniuk, Huiling Xiong, Paula Duarte-Guterman, Linhui Yao, Xuhua Xia, and Vance L Trudeau: Profiling neuroendocrine gene expression changes following fadrozole-induced estrogen decline in the female goldfish
Physiol. Genomics (June 9, 2009). doi:10.1152/physiolgenomics.00051.2009 [Abstract] [PDF]

Ian M. Packham, Caroline Gray, Paul R. Heath, Paul G. Hellewell, Philip W. Ingham, David C. Crossman, Marta Milo, and Timothy JA Chico: Microarray profiling reveals CXCR4a is downregulated by blood flow in vivo and mediates collateral formation in zebrafish embryos
Physiol. Genomics (June 9, 2009). doi:10.1152/physiolgenomics.00049.2009 [Abstract] [PDF] [Supplemental Videos]

Pu Dai, Andrew K Stewart, Fouad Chebib, Ann Hsu, Julia Rozenfeld, Deliang Huang, Dongyang Kang, Va Lip, Hong Fang, Hong Shao, Xin Liu, Fei Yu, Huijun Yuan, Margaret Kenna, David T. Miller, Yiping Shen, Weiyan Yang, Israel Zelikovic, Orah S. Platt, Dongyi Han, Seth L. Alper, and Bai-Lin Wu: Distinct and novel SLC26A4/Pendrin mutations in Chinese and U.S. patients with non-syndromic hearing loss
Physiol. Genomics (June 9, 2009). doi:10.1152/physiolgenomics.00047.2009 [Abstract] [PDF] [Supplemental Figures and Tables]

2 June 2009

Laila Alves Nahum, Sulip Goswami, and Margrethe Hauge Serres: Protein Families Reflect Metabolic Diversity of Organisms and Provide Support for Functional Prediction
Physiol. Genomics (June 2, 2009). doi:10.1152/physiolgenomics.90244.2008 [Abstract] [PDF] [Supplemental Tables]

Pierre Camateros, Cynthia Kanagaratham, Jennifer Henri, Rob Sladek, Thomas J. Hudson, and Danuta Radzioch: Modulation of the Allergic Asthma Transcriptome Following Resiquimod Treatment
Physiol. Genomics (June 2, 2009). doi:10.1152/physiolgenomics.00057.2009 [Abstract] [PDF] [Supplemental Figures and Tables]

26 May 2009

Mingyu Liang: MicroRNA: A new entrance to the broad paradigm of systems molecular medicine
Physiol. Genomics (May 26, 2009). doi:10.1152/physiolgenomics.00080.2009 [Abstract] [PDF]

Angele CHOPARD, Martine LECUNFF, Richard DANGER, Guillaume LAMIRAULT, Audrey BIHOUEE, Raluca TEUSAN, Bernard J. Jasmin, Jean-Francois Marini, and Jean J. LEGER: Large-scale mRNA analysis of female skeletal muscles during 60 days of bed rest with and without exercise or dietary protein supplementation as countermeasures
Physiol. Genomics (May 26, 2009). doi:10.1152/physiolgenomics.00036.2009 [Abstract] [PDF] [Supplemental Material]

Gerardo Manuel Nava, David Y. Lee, Javier H. Ospina, SHI-YING CAI, and H. Rex Gaskins: Genomic Analyses Reveal a Conserved Glutathione Homeostasis Pathway in the Invertebrate Chordate Ciona intestinalis
Physiol. Genomics (May 26, 2009). doi:10.1152/physiolgenomics.00025.2009 [Abstract] [PDF] [Supplemental Tables]

Heike Vogel, Matthias Nestler, Franz Rüschendorf, Marcel-Dominique Block, Sina Tischer, Reinhart Kluge, Annette Schurmann, Hans-Georg Joost, and Stephan Scherneck: Characterisation of Nob3, a major quantitative trait locus for obesity and hyperglycaemia on mouse Chromosome 1
Physiol. Genomics (May 26, 2009). doi:10.1152/physiolgenomics.00011.2009 [Abstract] [PDF] [Supplemental Figures and Tables]

19 May 2009

James D. McCully, Monoj K Bhasin, Christian Daly, Manuel C Guerrero, Simon Dillon, Towia A Liberman, Douglas B Cowan, John D Mably, Francis X. McGowan, and Sidney Levitsky: Transcriptomic and Proteomic Analysis of Global Ischemia and Cardioprotection in the Rabbit Heart
Physiol. Genomics (May 19, 2009). doi:10.1152/physiolgenomics.00033.2009 [Abstract] [PDF] [Supplemental Figures and Tables]

12 May 2009

Richard A Dennis, Haiyan Zhu, Patrick M. Kortebein, Heather M Bush, Jonathan F. Harvey, Dennis H Sullivan, and Charlotte A. Peterson: Muscle expression of genes associated with inflammation, growth, and remodeling is strongly correlated in older adults with resistance training outcomes
Physiol. Genomics (May 12, 2009). doi:10.1152/physiolgenomics.00056.2009 [Abstract] [PDF]

Theresia V Reding, Ulrich Wagner, Alberto B Silva, Li-Kang Sun, Martha Bain, Soo-Young Kim, Daniel Bimmler, and Rolf Graf: Inflammation-dependent expression of SPARC during development of chronic pancreatitis in WBN/Kob rats and a microarray gene expression analysis
Physiol. Genomics (May 12, 2009). doi:10.1152/physiolgenomics.00028.2009 [Abstract] [PDF] [Supplemental Figures and Tables]

5 May 2009

Daniel R Prows, Abby V Winterberg, William J Gibbons, Jr., Benjamin B Burzynski, Chunyan Liu, and Todd G Nick: Reciprocal Backcross Mice Confirm Major Loci Linked to Hyperoxic Acute Lung Injury Survival Time
Physiol. Genomics (May 5, 2009). doi:10.1152/physiolgenomics.90392.2008 [Abstract] [PDF] [Supplemental Tables]

Irina M Bochkis, Jonathan Schug, Nir E Rubins, Atul R Chopra, Bert W. O'Malley, and Klaus H Kaestner: Foxa2-Dependent Hepatic Gene Regulatory Networks Depend on Physiological State
Physiol. Genomics (May 5, 2009). doi:10.1152/physiolgenomics.90376.2008 [Abstract] [PDF] [Supplemental Tables]

Wei Wu, Michael E. Baker, Satish A. Eraly, Kevin T. Bush, and Sanjay K. Nigam: Analysis of a Large Cluster of SLC22 Transporter Genes, Including Novel USTs, Reveals Species-Specific Amplification of Subsets of Family Members
Physiol. Genomics (May 5, 2009). doi:10.1152/physiolgenomics.90309.2008 [Abstract] [PDF] [Supplemental Figures]

Andrea Pautz, Peter Rauschkolb, Nadine Schmidt, Julia Art, Matthias Oelze, Philip Wenzel, Ulrich Forstermann, Andreas Daiber, and Hartmut Kleinert: Effects of nitroglycerin- or pentaerithrityl tetranitrate treatment on the gene expression in rat hearts - evidence for cardiotoxic and cardioprotective effects
Physiol. Genomics (May 5, 2009). doi:10.1152/physiolgenomics.00035.2009 [Abstract] [PDF] [Supplemental Tables]

28 April 2009

Vincenzo Miragliotta, Kevin Raphael, Zoe Ipina, Jacques G Lussier, and Christine L Theoret: Equine thrombospondin II (THBS2) and secreted protein acidic and cysteine-rich (SPARC) in a model of normal and pathological wound repair
Physiol. Genomics (April 28, 2009). doi:10.1152/physiolgenomics.90383.2008 [Abstract] [PDF]

Nuria Comes and Teresa Borras: Individual molecular response to elevated Intraocular Pressure in perfused post-mortem human eyes
Physiol. Genomics (April 28, 2009). doi:10.1152/physiolgenomics.90261.2008 [Abstract] [PDF] [Supplemental Tables]

21 April 2009

Lisa Carraro, Serena Ferraresso, Barbara Cardazzo, Chiara Romualdi, Clara Montesissa, Flaviana Gottardo, Tomaso Patarnello, Massimo Castagnaro, and Luca Bargelloni: Expression profiling of skeletal muscle in young bulls treated with steroidal growth promoters
Physiol. Genomics (April 21, 2009). doi:10.1152/physiolgenomics.00014.2009 [Abstract] [PDF] [Supplemental Tables]

31 March 2009

Claudia Cappuzzello, Monica Napolitano, Diego Arcelli, Guido Melillo, Roberta Melchionna, Luca Di Vito, Daniele Carlini, Lorena Silvestri, Salvatore Brugaletta, Giovanna Liuzzo, Filippo Crea, and Maurizio C. Capogrossi: GENE EXPRESSION PROFILES IN PERIPHERAL BLOOD MONONUCLEAR CELLS OF CHRONIC HEART FAILURE PATIENTS
Physiol. Genomics (March 31, 2009). doi:10.1152/physiolgenomics.90364.2008 [Abstract] [PDF] [Clarification regarding Figure 5B]