Physiol. Genomics -- Table of Contents (March 21 2005, 21 [1])

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Call For Papers: Comparative Genomics:

Rosemarie Weikard, Christa Kühn, Tom Goldammer, Gertraude Freyer, and Manfred Schwerin: The bovine PPARGC1A gene: molecular characterization and association of an SNP with variation of milk fat synthesis
Physiol. Genomics 21: 1-13, 2005; doi:10.1152/physiolgenomics.00103.2004 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Research Articles:

Tatiana K. Zagranichnaya, Xiaoyan Wu, Arpad M. Danos, and Mitchel L. Villereal: Gene expression profiles in HEK-293 cells with low or high store-operated calcium entry: can regulatory as well as regulated genes be identified?
Physiol. Genomics 21: 14-33, 2005. First published December 28, 2004; doi:10.1152/physiolgenomics.00099.2004 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Sek Won Kong, Natalya Bodyak, Patrick Yue, Zhilin Liu, Jeffrey Brown, Seigo Izumo, and Peter M. Kang: Genetic expression profiles during physiological and pathological cardiac hypertrophy and heart failure in rats
Physiol. Genomics 21: 34-42, 2005. First published December 28, 2004; doi:10.1152/physiolgenomics.00226.2004 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Jiang Li, Maria L. Spletter, and Jeffrey A. Johnson: Dissecting tBHQ induced ARE-driven gene expression through long and short oligonucleotide arrays
Physiol. Genomics 21: 43-58, 2005. First published December 21, 2004; doi:10.1152/physiolgenomics.00214.2004 [Abstract] [Full Text] [PDF] [Supplemental Material]

Cristina Diez-Tascón, Orla M. Keane, Theresa Wilson, Amonida Zadissa, Dianne L. Hyndman, David B. Baird, John C. McEwan, and Allan M. Crawford: Microarray analysis of selection lines from outbred populations to identify genes involved with nematode parasite resistance in sheep
Physiol. Genomics 21: 59-69, 2005. First published December 28, 2004; doi:10.1152/physiolgenomics.00257.2004 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Javad Nazarian, Khaled Bouri, and Eric P. Hoffman: Intracellular expression profiling by laser capture microdissection: three novel components of the neuromuscular junction
Physiol. Genomics 21: 70-80, 2005. First published December 28, 2004; doi:10.1152/physiolgenomics.00227.2004 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Nils W. G. Lambrecht, Iskandar Yakubov, David Scott, and George Sachs: Identification of the K efflux channel coupled to the gastric H-K-ATPase during acid secretion
Physiol. Genomics 21: 81-91, 2005. First published December 21, 2004; doi:10.1152/physiolgenomics.00212.2004 [Abstract] [Full Text] [PDF]

Rick D. Fannin, J. Todd Auman, Maribel E. Bruno, Stella O. Sieber, Sandra M. Ward, Charles J. Tucker, B. Alex Merrick, and Richard S. Paules: Differential gene expression profiling in whole blood during acute systemic inflammation in lipopolysaccharide-treated rats
Physiol. Genomics 21: 92-104, 2005; doi:10.1152/physiolgenomics.00190.2004 [Abstract] [Full Text] [PDF] [Supplemental Tables]

Kate G. Ackerman, Hailu Huang, Hartmut Grasemann, Chris Puma, Jonathan B. Singer, Annie E. Hill, Eric Lander, Joseph H. Nadeau, Gary A. Churchill, Jeffrey M. Drazen, and David R. Beier: Interacting genetic loci cause airway hyperresponsiveness
Physiol. Genomics 21: 105-111, 2005. First published January 18, 2005; doi:10.1152/physiolgenomics.00267.2004 [Abstract] [Full Text] [PDF]

Myrian Grondin, Vasiliki Eliopoulos, Raphaelle Lambert, Yishu Deng, Anita Ariyarajah, Myriam Moujahidine, Julie Dutil, Sophie Charron, and Alan Y. Deng: Complete and overlapping congenics proving the existence of a quantitative trait locus for blood pressure on Dahl rat chromosome 17
Physiol. Genomics 21: 112-116, 2005. First published January 4, 2005; doi:10.1152/physiolgenomics.00275.2004 [Abstract] [Full Text] [PDF]

Anu Sharma, Vineet K. Sharma, Shirley Horn-Saban, Doron Lancet, Srinivasan Ramachandran, and Samir K. Brahmachari: Assessing natural variations in gene expression in humans by comparing with monozygotic twins using microarrays
Physiol. Genomics 21: 117-123, 2005. First published January 11, 2005; doi:10.1152/physiolgenomics.00228.2003 [Abstract] [Full Text] [PDF]

Stacie R. Frye, Andrew Yee, Suzanne G. Eskin, Rudy Guerra, Xiuyu Cong, and Larry V. McIntire: cDNA microarray analysis of endothelial cells subjected to cyclic mechanical strain: importance of motion control
Physiol. Genomics 21: 124-130, 2005. First published January 4, 2005; doi:10.1152/physiolgenomics.00029.2003 [Abstract] [Full Text] [PDF]

Cover Caption:

Cover Cover: Expression of the ife-4::GFP transgene as an extrachromosomal array during Caenorhabditis elegans development. ife-4::GFP(lsEx385) animals were hypochlorite treated to obtain embryos and grown to the desired developmental stages. Animals in larval stage 4 were imaged with a Nomarski miscroscope (top left) and epifluorescence (top right). Polysomal behavior of mRNAs for ife-4(ok320) vs. N2 in subpopulations of C. elegans defined by developmental expression patterns (bottom). For details, see Trutschl M, Dinkova TD, and Rhoads RE. Application of machine learning and visualization of heterogenous data sets to uncover relationships between translation and developmental state expression of C. elegans mRNAs. Physiol. Genomics 21: 264-273, 2005. First published February 8, 2005; doi: 10.1152/physiolgenomics.00307.2004.