Physiol. Genomics AJP: Advances in Physiology Education
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Physiol. Genomics (October 29, 2002). doi:10.1152/physiolgenomics.00073.2002
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Articles in PresS, published online ahead of print October 29, 2002
Physiol Genomics, 10.1152/physiolgenomics.00073.2002
Submitted on June 11, 2002
Accepted on October 25, 2002

Exon truncation by alternative splicing of murine ICAM-1

Joseph P Mizgerd1*, Matt R Spieker1, and Michal M Lupa1

1 Physiology Program, Harvard School of Public Health, Boston, MA, USA

* To whom correspondence should be addressed. E-mail: jmizgerd{at}hsph.harvard.edu.

The murine gene for ICAM-1 encodes multiple products, arising from alternative splicing. Full-length ICAM-1 contains 5 extracellular Ig domains, each encoded by a separate exon. Alternatively spliced forms have Ig domains 2, 3, and/or 4 excised as a result of exon skipping. We report here a novel splice variant of murine ICAM-1, resulting from exon truncation rather than exon skipping and affecting Ig domain 5. A 5' splice donor site within exon 6 generates transcripts missing 69 nucleic acids from the 3' terminus of the exon. This in-frame exon truncation is predicted to replace 24 amino acids within Ig domain 5 with a single aspartic acid residue, yielding a structure other than an Ig domain immediately external to the membrane. Expression of this alternatively spliced form is induced in mouse lungs, spleen, and kidneys during LPS-induced pulmonary inflammation. Since the affected region is critical for ICAM-1 presentation, dimerization, and solubilization, this alternative splice variant may have unique physiological functions.







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