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Physiol. Genomics (August 1, 2006). doi:10.1152/physiolgenomics.00072.2006 Free Article
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Submitted on April 27, 2006
Accepted on July 26, 2006

MICROARRAY ANALYSIS OF GENE EXPRESSION DURING EARLY STAGES OF MILD AND SEVERE CARDIAC HYPERTROPHY

Sudarsan Rajan1, Sarah S. Williams2, Ganapathy Jagatheesan1, Rafeeq P.H. Ahmed1, Geraldine Fuller-Bicer3, Arnold Schwartz3, Bruce J. Aronow2, and David F Wieczorek4*

1 Molecular Genetics, Biochemistry and Microbiology, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States
2 Division of Biomedical Informatics, Children's Hospital Medical Center, Cincinnati, Ohio, United States
3 Institute of Molecular Pharmacology and Biophysics, University of Cincinnati, Cincinnati, Ohio, United States
4 Molecular Genetics, Biochemistry, and Microbiology, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States

* To whom correspondence should be addressed. E-mail: david.wieczorek{at}uc.edu.

Familial hypertrophic cardiomyopathy (FHC) is a disease characterized by ventricular hypertrophy, fibrosis, and aberrant systolic and/or diastolic function. We previously developed two transgenic mouse models that carry FHC associated mutations in {alpha}-tropomyosin (TM): FHC {alpha}-TM175 mice show patchy areas of mild ventricular disorganization and limited hypertrophy; whereas FHC {alpha}-TM180 mice exhibit severe hypertrophy and fibrosis, and die within 6 months. To obtain a better understanding of the molecular mechanisms associated with the early onset of cardiac hypertrophy, we conducted a detailed comparative analysis of gene expression in 2.5-month-old control, FHC {alpha}-TM175, and {alpha}-TM180 ventricular tissue. Results show that 754 genes (from a total of 22,600) were differentially expressed between the NTG and the FHC hearts. There are 178 differentially regulated genes between NTG and the FHC {alpha}-TM175 hearts, 388 genes are differentially expressed between NTG and FHC {alpha}-TM180 hearts, and 266 genes are differentially expressed between FHC {alpha}-TM175 and FHC {alpha}-TM180 hearts. Genes that exhibit the largest increase in expression belong to the "secreted/extracellular matrix" category, and those with the most significant decrease in expression are associated with "metabolic enzymes." Confirmation of the microarray analysis was conducted by quantitative real-time PCR on gene transcripts commonly associated with cardiac hypertrophy.




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